As for the detail, the easy answer is "not enough pressure". My speculation is that they were not struck with a screw or water press, but with a steam press. If so, the pressure setting was wrong or the machine did not function properly. A wrong setting is understandable, especially since the coin is much thicker than usual and Isfahan is a provincial mint, but the weak strikes should have been noticed fairly quickly. Therefore, I would say the press wasn't functioning optimally. Machines of this time were big, clanky affairs that had to be oiled and maintained constantly. Without a qualified engineer, that could have caused the weak strike in multiple ways.
Today, dies are "clicked" into place, so you may indeed expect perfectly aligned dies. However, in early presses, dies would sometimes be screwed in place. Dies will shake loose by the striking operation, so they'll be fastened with more and more power and the screw thread will wear. A die divergence of say 15% or less in coins struck by such presses is not unusual.
Peter